TMM3009: Biomedical Research Laboratory
This course facilitates the development of core technical, analytical and scientific communication skills required for successful future biomedical studies and careers. The course has two parts, an interactive training part that develops foundational knowledge of biomedical research approaches and hands-on expertise with commonly-used laboratory techniques, and a practical part that reinforces acquired competencies through the completion of two independent scientific projects under the supervision of a TMM Faculty member.
TMM3101: Molecular Biology and Inherited Diseases
Synopsis
This course introduces the central contribution to inherited and chronic disorders of molecular mechanisms involved in gene expression, protein translation, DNA replication, repair and recombination. While the course emphasizes how these fundamental mechanisms are altered and assessed in human disease, it also introduces examples of unconventional disease mechanism that go beyond the central dogma of molecular biology.
Key objectives and core competencies
By the end of this course, the student will be able to:
- Understand the fundamental mechanisms by which DNA is made into protein and apply that
- Describe the levels of regulation that govern important molecular processes
- Apply the knowledge of basic molecular pathways to evaluate the pathology of various molecular disorders and molecular problems
- Evaluate and integrate methodologies (basic and cutting-edge) in molecular biomedical research
Evaluations
- Quiz 1 (Lectures 2-5) - 12.5%
- Midterm 1 (Lectures 1-12) - 25%
- Quiz 2 (Lectures 13-16) - 12.5%
- Midterm 2 (Lectures 13-23) - 25%
TMM3102: Proteins: Structure, Functions and Diseases
Synopsis
This course develops a foundation for elucidating the molecular basis of disease and molecular therapies by introducing knowledge and approaches to study the structure and the mechanisms of action of proteins and other biological macromolecules. The course emphasizes general principles determining the activity of biological macromolecules, methods to solve and visualize protein structures, and approaches used to understand how proteins, DNA, RNA, membranes and other biomolecules work in concert to support cells, tissues and organs.
Key objectives and core competencies
By the end of this course, the student will be able to:
- Understand the structure/function relationship in proteins
- Put in a biological (disease or not) context the concepts related to Km, KD et Ki
- Interpretation of the impact of protein misfolding in various diaseses
- Understand the importance of structural biology in the identification of therapeutic molecules
- Learn how to use Pymol
Evaluations
- Quiz 5%
- Mid terms 2x20%=40%
- Assignment 15%
- Final Exam 40%
TMM3103: Metabolic Pathways of Human Diseases
Synopsis
This course aims to provide a knowledge of the genetic and environmental factors that exert an influence on metabolic pathways, energy metabolism and human health. It covers a wide range of topics from dietary nutrients and bioenergetics to metabolic abnormalities and the prevention and treatment of metabolic diseases. The course emphasizes the development of an integrated perspective to understand how interconnectivity of genetic and environmental factors contribute to metabolic disease or exacerbate disease progression.
Key objectives and core competencies
By the end of this course, the learners are expected to:
- Understand the process of nutrient (e.g. carbohydrates, lipids, and amino acids) breakdown that is intimately linked to bioenergetics (i.e. ATP and reducing agent formation).
- Appreciate the concept of subcellular compartmentalization of biochemical reactions involved in energy production and energy consumption, particularly the importance of mitochondrial integrity.
- Familiarize with the biosynthetic pathways for cholesterol, triglycerides, amino acids, and plasma lipoproteins, and identify rate-limiting steps in each synthetic pathway.
- Grasp the notion of interconnectivity and non-linearity of various metabolic pathways, and understand the flux of key intermediates between anaplerosis and cataplerosis.
- Gain knowledge on hormonal regulation of energy homeostasis through kinase-mediated signaling, and apply these knowledge to metabolic diseases known as Metabolic Syndromes.
Breakdown of the marks
- 40% mid-term
- 20% oral presentation
- 40% final (not cumulative)
TMM3104: Cellular Basis of Disease
Synopsis
This course provides the knowledge foundation for understanding mechanisms by which aberrations in the cell machinery contribute to human disease. The course covers a broad range of mammalian cell biology topics from organelles and intracellular trafficking to apoptosis, differentiation and cell migration. The course also introduces the use of synthetic biology approaches to modulate cellular function or engineer entirely novel properties.
Key Objectives and Core Competencies
By the end of the course the learner should be able to:
- Identify and explain the function of mammalian organelles
- Understand the difference between eukaryotic and prokaryotic cells
- Understand the molecular pathways that govern cell migration, division, death & differentiation
- Understand the GTPase-dependent molecular machinery that regulates intracellular transport
- Understand major pathways of cell communication via vesicles & ligand/receptor interactions
Evaluation
- 10% Independent learning video presentation
- 5% Drug discovery activity (Rayner)
- 5%Participation in class learning activities (Lee)
- 40% Midterm
- 40% Final Exam